IL_6YSI_095
3D structure
- PDB id
- 6YSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Acinetobacter baumannii ribosome-tigecycline complex - 50S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGGAAG*UGAAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YSI_095 not in the Motif Atlas
- Homologous match to IL_5J7L_354
- Geometric discrepancy: 0.197
- The information below is about IL_5J7L_354
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6YSI|1|1|U|2836
6YSI|1|1|G|2837
6YSI|1|1|G|2838
6YSI|1|1|A|2839
6YSI|1|1|A|2840
6YSI|1|1|G|2841
*
6YSI|1|1|U|2854
6YSI|1|1|G|2855
6YSI|1|1|A|2856
6YSI|1|1|A|2857
6YSI|1|1|G|2858
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L17
- Chain L
- 50S ribosomal protein L19
Coloring options: