IL_6YSR_084

3D structure

PDB id

6YSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAG*CGACCUUGAAAUAC

Length

18 nucleotides

Bulged bases

6YSR|1|A|A|2126, 6YSR|1|A|A|2163, 6YSR|1|A|G|2168

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSR|1|A|G|2124
6YSR|1|A|G|2125
6YSR|1|A|A|2126
6YSR|1|A|G|2127
*
6YSR|1|A|C|2161
6YSR|1|A|G|2162
6YSR|1|A|A|2163
6YSR|1|A|C|2164
6YSR|1|A|C|2165
6YSR|1|A|U|2166
6YSR|1|A|U|2167
6YSR|1|A|G|2168
6YSR|1|A|A|2169
6YSR|1|A|A|2170
6YSR|1|A|A|2171
6YSR|1|A|U|2172
6YSR|1|A|A|2173
6YSR|1|A|C|2174

Current chains

Chain A

23S ribosomal RNA

Nearby chains