IL_6YSR_158

3D structure

PDB id

6YSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 stalled ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSR|1|a|G|1003
6YSR|1|a|A|1004
6YSR|1|a|A|1005
6YSR|1|a|G|1006
*
6YSR|1|a|U|1023
6YSR|1|a|G|1024
6YSR|1|a|U|1025
6YSR|1|a|G|1026
6YSR|1|a|C|1027
6YSR|1|a|C|1028
6YSR|1|a|U|1029
6YSR|1|a|U|1030
6YSR|1|a|C|1031
6YSR|1|a|G|1032
6YSR|1|a|G|1033
6YSR|1|a|G|1034
6YSR|1|a|A|1035
6YSR|1|a|A|1036
6YSR|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14