3D structure

PDB id
6YST (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
CCCAGACAG*UCGAG
Length
14 nucleotides
Bulged bases
6YST|1|A|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6YST|1|A|C|1043
6YST|1|A|C|1044
6YST|1|A|C|1045
6YST|1|A|A|1046
6YST|1|A|G|1047
6YST|1|A|A|1048
6YST|1|A|C|1049
6YST|1|A|A|1050
6YST|1|A|G|1051
*
6YST|1|A|U|1108
6YST|1|A|C|1109
6YST|1|A|G|1110
6YST|1|A|A|1111
6YST|1|A|G|1112

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain 5
50S ribosomal protein L10
Chain G
50S ribosomal protein L6

Coloring options:

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