3D structure

PDB id
6YST (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
AGCCUU*AAUGUU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6YST|1|A|A|2101
6YST|1|A|G|2102
6YST|1|A|C|2103
6YST|1|A|C|2104
6YST|1|A|U|2105
6YST|1|A|U|2106
*
6YST|1|A|A|2183
6YST|1|A|A|2184
6YST|1|A|U|2185
6YST|1|A|G|2186
6YST|1|A|U|2187
6YST|1|A|U|2188

Current chains

Chain A
23S ribosomal RNA

Nearby chains

Chain k
30S ribosomal protein S11

Coloring options:

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