3D structure

PDB id
6YST (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GAAGU*AUGUGCCUUCGGGAAC
Length
21 nucleotides
Bulged bases
6YST|1|a|U|1025, 6YST|1|a|C|1031
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6YST|1|a|G|1003
6YST|1|a|A|1004
6YST|1|a|A|1005
6YST|1|a|G|1006
6YST|1|a|U|1007
*
6YST|1|a|A|1022
6YST|1|a|U|1023
6YST|1|a|G|1024
6YST|1|a|U|1025
6YST|1|a|G|1026
6YST|1|a|C|1027
6YST|1|a|C|1028
6YST|1|a|U|1029
6YST|1|a|U|1030
6YST|1|a|C|1031
6YST|1|a|G|1032
6YST|1|a|G|1033
6YST|1|a|G|1034
6YST|1|a|A|1035
6YST|1|a|A|1036
6YST|1|a|C|1037

Current chains

Chain a
16S ribosomal RNA

Nearby chains

Chain n
30S ribosomal protein S14

Coloring options:

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