IL_6YST_154

3D structure

PDB id

6YST (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGU*AUGUGCCUUCGGGAAC

Length

21 nucleotides

Bulged bases

6YST|1|a|U|1025, 6YST|1|a|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YST|1|a|G|1003
6YST|1|a|A|1004
6YST|1|a|A|1005
6YST|1|a|G|1006
6YST|1|a|U|1007
*
6YST|1|a|A|1022
6YST|1|a|U|1023
6YST|1|a|G|1024
6YST|1|a|U|1025
6YST|1|a|G|1026
6YST|1|a|C|1027
6YST|1|a|C|1028
6YST|1|a|U|1029
6YST|1|a|U|1030
6YST|1|a|C|1031
6YST|1|a|G|1032
6YST|1|a|G|1033
6YST|1|a|G|1034
6YST|1|a|A|1035
6YST|1|a|A|1036
6YST|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14