IL_6YST_179

3D structure

PDB id

6YST (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUUGAUG*UUGAUCGAAGC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YST|1|A|G|1850
6YST|1|A|U|1851
6YST|1|A|U|1852
6YST|1|A|A|1853
6YST|1|A|A|1854
6YST|1|A|U|1855
6YST|1|A|U|1856
6YST|1|A|G|1857
6YST|1|A|A|1858
6YST|1|A|U|1859
6YST|1|A|G|1860
*
6YST|1|A|U|1882
6YST|1|A|U|1883
6YST|1|A|G|1884
6YST|1|A|A|1885
6YST|1|A|U|1886
6YST|1|A|C|1887
6YST|1|A|G|1888
6YST|1|A|A|1889
6YST|1|A|A|1890
6YST|1|A|G|1891
6YST|1|A|C|1892

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain w

Transfer RNA; tRNA