IL_6YSU_040

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AUGUUG*CAUCAUU

Length

13 nucleotides

Bulged bases

6YSU|1|A|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|A|A|1057
6YSU|1|A|U|1058
6YSU|1|A|G|1059
6YSU|1|A|U|1060
6YSU|1|A|U|1061
6YSU|1|A|G|1062
*
6YSU|1|A|C|1076
6YSU|1|A|A|1077
6YSU|1|A|U|1078
6YSU|1|A|C|1079
6YSU|1|A|A|1080
6YSU|1|A|U|1081
6YSU|1|A|U|1082

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 5

50S ribosomal protein L10

Chain I

50S ribosomal protein L11