IL_6YSU_109

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUGUGUAAG*UUGAGCUAAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|A|G|2843
6YSU|1|A|G|2844
6YSU|1|A|U|2845
6YSU|1|A|G|2846
6YSU|1|A|U|2847
6YSU|1|A|G|2848
6YSU|1|A|U|2849
6YSU|1|A|A|2850
6YSU|1|A|A|2851
6YSU|1|A|G|2852
*
6YSU|1|A|U|2865
6YSU|1|A|U|2866
6YSU|1|A|G|2867
6YSU|1|A|A|2868
6YSU|1|A|G|2869
6YSU|1|A|C|2870
6YSU|1|A|U|2871
6YSU|1|A|A|2872
6YSU|1|A|A|2873
6YSU|1|A|C|2874

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19