IL_6YSU_157

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAGU*AUGUGCCUUCGGGAAC

Length

21 nucleotides

Bulged bases

6YSU|1|a|U|1025, 6YSU|1|a|U|1030, 6YSU|1|a|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|a|G|1003
6YSU|1|a|A|1004
6YSU|1|a|A|1005
6YSU|1|a|G|1006
6YSU|1|a|U|1007
*
6YSU|1|a|A|1022
6YSU|1|a|U|1023
6YSU|1|a|G|1024
6YSU|1|a|U|1025
6YSU|1|a|G|1026
6YSU|1|a|C|1027
6YSU|1|a|C|1028
6YSU|1|a|U|1029
6YSU|1|a|U|1030
6YSU|1|a|C|1031
6YSU|1|a|G|1032
6YSU|1|a|G|1033
6YSU|1|a|G|1034
6YSU|1|a|A|1035
6YSU|1|a|A|1036
6YSU|1|a|C|1037

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain n

30S ribosomal protein S14