IL_6YSU_160
3D structure
- PDB id
- 6YSU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGCAUG*CAUG
- Length
- 10 nucleotides
- Bulged bases
- 6YSU|1|a|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6YSU_160 not in the Motif Atlas
- Geometric match to IL_6CZR_365
- Geometric discrepancy: 0.1799
- The information below is about IL_6CZR_365
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_45699.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6YSU|1|a|U|1052
6YSU|1|a|G|1053
6YSU|1|a|C|1054
6YSU|1|a|A|1055
6YSU|1|a|U|1056
6YSU|1|a|G|1057
*
6YSU|1|a|C|1203
6YSU|1|a|A|1204
6YSU|1|a|U|1205
6YSU|1|a|G|1206
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain y
- Alternative stalled-ribosome rescue factor B
Coloring options: