IL_6YSU_204

3D structure

PDB id

6YSU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the P+0 ArfB-ribosome complex in the post-hydrolysis state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAGAAGU*ACCACU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6YSU|1|a|A|1430
6YSU|1|a|A|1431
6YSU|1|a|G|1432
6YSU|1|a|A|1433
6YSU|1|a|A|1434
6YSU|1|a|G|1435
6YSU|1|a|U|1436
*
6YSU|1|a|A|1465
6YSU|1|a|C|1466
6YSU|1|a|C|1467
6YSU|1|a|A|1468
6YSU|1|a|C|1469
6YSU|1|a|U|1470

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19

Chain t

30S ribosomal protein S20