IL_6Z1P_008

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Z1P_008 not in the Motif Atlas

Homologous match to IL_7RQB_017

Geometric discrepancy: 0.1101

The information below is about IL_7RQB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

6Z1P|1|Ab|C|553
6Z1P|1|Ab|C|554
6Z1P|1|Ab|G|555
*
6Z1P|1|Ab|C|681
6Z1P|1|Ab|U|682
6Z1P|1|Ab|G|683

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain Ae

50S ribosomal protein L4

Chain Aq

Ribosomal protein L15, putative