IL_6Z1P_011

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UU*GGA

Length

5 nucleotides

Bulged bases

6Z1P|1|Ab|G|604

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Z1P_011 not in the Motif Atlas

Geometric match to IL_4V9F_026

Geometric discrepancy: 0.1836

The information below is about IL_4V9F_026

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

6Z1P|1|Ab|U|583
6Z1P|1|Ab|U|584
*
6Z1P|1|Ab|G|603
6Z1P|1|Ab|G|604
6Z1P|1|Ab|A|605

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain Ac

Ribosomal protein L2