IL_6Z1P_019

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUA*UUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6Z1P_019 not in the Motif Atlas

Homologous match to IL_7RQB_034

Geometric discrepancy: 0.2472

The information below is about IL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

6Z1P|1|Ab|U|819
6Z1P|1|Ab|U|820
6Z1P|1|Ab|A|821
*
6Z1P|1|Ab|U|832
6Z1P|1|Ab|U|833
6Z1P|1|Ab|A|834

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AQ

mL102

Chain Ar

Ribosomal protein L16

Chain Av

50S ribosomal protein L21