IL_6Z1P_028
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUAUA*UAUC
- Length
- 9 nucleotides
- Bulged bases
- 6Z1P|1|Ab|U|1084
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_028 not in the Motif Atlas
- Homologous match to IL_5J7L_287
- Geometric discrepancy: 0.2142
- The information below is about IL_5J7L_287
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_91920.1
- Basepair signature
- cWW-cWW-tHH-cWW
- Number of instances in this motif group
- 1
Unit IDs
6Z1P|1|Ab|G|1081
6Z1P|1|Ab|U|1082
6Z1P|1|Ab|A|1083
6Z1P|1|Ab|U|1084
6Z1P|1|Ab|A|1085
*
6Z1P|1|Ab|U|1115
6Z1P|1|Ab|A|1116
6Z1P|1|Ab|U|1117
6Z1P|1|Ab|C|1118
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AJ
- Ribosomal protein L51/S25/CI-B8 domain protein
- Chain AV
- Iron-binding zinc finger CDGSH type protein
- Chain Aa
- LSU rRNA_1
- Chain Ae
- 50S ribosomal protein L4
- Chain Aq
- Ribosomal protein L15, putative
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