IL_6Z1P_058
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUAAU*AUAU
- Length
- 9 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|2095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_058 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.3943
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
6Z1P|1|Ab|A|2093
6Z1P|1|Ab|U|2094
6Z1P|1|Ab|A|2095
6Z1P|1|Ab|A|2096
6Z1P|1|Ab|U|2097
*
6Z1P|1|Ab|A|2108
6Z1P|1|Ab|U|2109
6Z1P|1|Ab|A|2110
6Z1P|1|Ab|U|2111
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AE
- 50S ribosomal protein L33
- Chain AF
- bL35m
- Chain AO
- mL64
- Chain Aa
- LSU rRNA_1
- Chain Aq
- Ribosomal protein L15, putative
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