IL_6Z1P_063
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUGAG*UAAUA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_063 not in the Motif Atlas
- Homologous match to IL_5J7L_338
- Geometric discrepancy: 0.2858
- The information below is about IL_5J7L_338
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
6Z1P|1|Ab|U|2160
6Z1P|1|Ab|U|2161
6Z1P|1|Ab|G|2162
6Z1P|1|Ab|A|2163
6Z1P|1|Ab|G|2164
*
6Z1P|1|Ab|U|2174
6Z1P|1|Ab|A|2175
6Z1P|1|Ab|A|2176
6Z1P|1|Ab|U|2177
6Z1P|1|Ab|A|2178
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AG
- Ribosomal protein
- Chain AN
- mL54
- Chain AQ
- mL102
- Chain Ar
- Ribosomal protein L16
Coloring options: