IL_6Z1P_086
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUGCC*GAUU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_086 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.2843
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60988.2
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
6Z1P|1|Ba|A|154
6Z1P|1|Ba|U|155
6Z1P|1|Ba|G|156
6Z1P|1|Ba|C|157
6Z1P|1|Ba|C|158
*
6Z1P|1|Bb|G|233
6Z1P|1|Bb|A|234
6Z1P|1|Bb|U|235
6Z1P|1|Bb|U|236
Current chains
- Chain Ba
- SSU rRNA_1
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain BE
- mS45
- Chain Bp
- 30S ribosomal protein S16
- Chain Bv
- mS26
Coloring options: