IL_6Z1P_089

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UAUUAG*CUAGAUG

Length

13 nucleotides

Bulged bases

6Z1P|1|Bb|U|250, 6Z1P|1|Bb|A|305

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|U|248
6Z1P|1|Bb|A|249
6Z1P|1|Bb|U|250
6Z1P|1|Bb|U|251
6Z1P|1|Bb|A|252
6Z1P|1|Bb|G|253
*
6Z1P|1|Bb|C|303
6Z1P|1|Bb|U|304
6Z1P|1|Bb|A|305
6Z1P|1|Bb|G|306
6Z1P|1|Bb|A|307
6Z1P|1|Bb|U|308
6Z1P|1|Bb|G|309

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain Ba

SSU rRNA_1

Chain Bo

30S ribosomal protein S15

Chain Bq

30S ribosomal protein S17