IL_6Z1P_122
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6Z1P|1|Bb|C|1027
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_122 not in the Motif Atlas
- Geometric match to IL_4V88_450
- Geometric discrepancy: 0.1676
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6Z1P|1|Bb|U|1025
6Z1P|1|Bb|G|1026
6Z1P|1|Bb|C|1027
6Z1P|1|Bb|A|1028
6Z1P|1|Bb|U|1029
*
6Z1P|1|Bb|A|1216
6Z1P|1|Bb|U|1217
6Z1P|1|Bb|G|1218
Current chains
- Chain Bb
- SSU rRNA_2
Nearby chains
- Chain Bd
- Ymf64
- Chain Bj
- Ymf59
- Chain Bn
- Ribosomal protein S14
- Chain By
- mS33
Coloring options: