IL_6Z1P_139

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCGGAAG*CCAAUC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|G|1440
6Z1P|1|Bb|C|1441
6Z1P|1|Bb|G|1442
6Z1P|1|Bb|G|1443
6Z1P|1|Bb|A|1444
6Z1P|1|Bb|A|1445
6Z1P|1|Bb|G|1446
*
6Z1P|1|Bb|C|1534
6Z1P|1|Bb|C|1535
6Z1P|1|Bb|A|1536
6Z1P|1|Bb|A|1537
6Z1P|1|Bb|U|1538
6Z1P|1|Bb|C|1539

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain Ab

Large subunit ribosomal RNA; LSU rRNA

Chain Ad

50S ribosomal protein L3

Chain Ap

Ribosomal protein L14

Chain At

bL19m