IL_6Z1P_144
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GC*GUGAAAAGAUUUUAUAAUAUCUUAAAAGAACC
- Length
- 34 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|390, 6Z1P|1|Ab|U|391, 6Z1P|1|Ab|A|393, 6Z1P|1|Ab|U|394, 6Z1P|1|Ab|A|406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6Z1P|1|Aa|G|31
6Z1P|1|Aa|C|32
*
6Z1P|1|Ab|G|377
6Z1P|1|Ab|U|378
6Z1P|1|Ab|G|379
6Z1P|1|Ab|A|380
6Z1P|1|Ab|A|381
6Z1P|1|Ab|A|382
6Z1P|1|Ab|A|383
6Z1P|1|Ab|G|384
6Z1P|1|Ab|A|385
6Z1P|1|Ab|U|386
6Z1P|1|Ab|U|387
6Z1P|1|Ab|U|388
6Z1P|1|Ab|U|389
6Z1P|1|Ab|A|390
6Z1P|1|Ab|U|391
6Z1P|1|Ab|A|392
6Z1P|1|Ab|A|393
6Z1P|1|Ab|U|394
6Z1P|1|Ab|A|395
6Z1P|1|Ab|U|396
6Z1P|1|Ab|C|397
6Z1P|1|Ab|U|398
6Z1P|1|Ab|U|399
6Z1P|1|Ab|A|400
6Z1P|1|Ab|A|401
6Z1P|1|Ab|A|402
6Z1P|1|Ab|A|403
6Z1P|1|Ab|G|404
6Z1P|1|Ab|A|405
6Z1P|1|Ab|A|406
6Z1P|1|Ab|C|407
6Z1P|1|Ab|C|408
Current chains
- Chain Aa
- LSU rRNA_1
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AT
- Signal peptide-binding domain protein
- Chain Aw
- Ribosomal protein L22/L17e
- Chain Ay
- 50S ribosomal protein L24
Coloring options: