3D structure

PDB id
6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the mitochondrial ribosome from Tetrahymena thermophila
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
UAGGUUUAAAUAA*UAUAUAAUAAUUA
Length
26 nucleotides
Bulged bases
6Z1P|1|Ab|A|739
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6Z1P|1|Ab|U|731
6Z1P|1|Ab|A|732
6Z1P|1|Ab|G|733
6Z1P|1|Ab|G|734
6Z1P|1|Ab|U|735
6Z1P|1|Ab|U|736
6Z1P|1|Ab|U|737
6Z1P|1|Ab|A|738
6Z1P|1|Ab|A|739
6Z1P|1|Ab|A|740
6Z1P|1|Ab|U|741
6Z1P|1|Ab|A|742
6Z1P|1|Ab|A|743
*
6Z1P|1|Ab|U|780
6Z1P|1|Ab|A|781
6Z1P|1|Ab|U|782
6Z1P|1|Ab|A|783
6Z1P|1|Ab|U|784
6Z1P|1|Ab|A|785
6Z1P|1|Ab|A|786
6Z1P|1|Ab|U|787
6Z1P|1|Ab|A|788
6Z1P|1|Ab|A|789
6Z1P|1|Ab|U|790
6Z1P|1|Ab|U|791
6Z1P|1|Ab|A|792

Current chains

Chain Ab
LSU rRNA_2

Nearby chains

Chain AA
50S ribosomal protein L27
Chain AH
mL40
Chain Ar
Ribosomal protein L16
Chain Av
50S ribosomal protein L21
Chain Az
bL25m

Coloring options:

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