IL_6Z1P_158
3D structure
- PDB id
- 6Z1P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mitochondrial ribosome from Tetrahymena thermophila
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUAA*UAU
- Length
- 7 nucleotides
- Bulged bases
- 6Z1P|1|Ab|A|2095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z1P_158 not in the Motif Atlas
- Geometric match to IL_5ML7_010
- Geometric discrepancy: 0.321
- The information below is about IL_5ML7_010
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 29
Unit IDs
6Z1P|1|Ab|A|2093
6Z1P|1|Ab|U|2094
6Z1P|1|Ab|A|2095
6Z1P|1|Ab|A|2096
*
6Z1P|1|Ab|U|2109
6Z1P|1|Ab|A|2110
6Z1P|1|Ab|U|2111
Current chains
- Chain Ab
- LSU rRNA_2
Nearby chains
- Chain AE
- 50S ribosomal protein L33
- Chain AF
- bL35m
- Chain AO
- mL64
- Chain Aa
- LSU rRNA_1
- Chain Aq
- Ribosomal protein L15, putative
Coloring options: