IL_6Z1P_175

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UGAAAAACUC*GUUGAAAAGUAG

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Bb|U|1450
6Z1P|1|Bb|G|1451
6Z1P|1|Bb|A|1452
6Z1P|1|Bb|A|1453
6Z1P|1|Bb|A|1454
6Z1P|1|Bb|A|1455
6Z1P|1|Bb|A|1456
6Z1P|1|Bb|C|1457
6Z1P|1|Bb|U|1458
6Z1P|1|Bb|C|1459
*
6Z1P|1|Bb|G|1519
6Z1P|1|Bb|U|1520
6Z1P|1|Bb|U|1521
6Z1P|1|Bb|G|1522
6Z1P|1|Bb|A|1523
6Z1P|1|Bb|A|1524
6Z1P|1|Bb|A|1525
6Z1P|1|Bb|A|1526
6Z1P|1|Bb|G|1527
6Z1P|1|Bb|U|1528
6Z1P|1|Bb|A|1529
6Z1P|1|Bb|G|1530

Current chains

Chain Bb

SSU rRNA_2

Nearby chains

Chain Ab

Large subunit ribosomal RNA; LSU rRNA

Chain At

bL19m

Chain BV

mS90

Chain BY

mS93