IL_6Z1P_180

3D structure

PDB id

6Z1P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mitochondrial ribosome from Tetrahymena thermophila

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AAUAU*ACUGGAAAUGU

Length

16 nucleotides

Bulged bases

6Z1P|1|Ab|U|1338, 6Z1P|1|Ab|U|1344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z1P|1|Ab|A|1269
6Z1P|1|Ab|A|1270
6Z1P|1|Ab|U|1271
6Z1P|1|Ab|A|1272
6Z1P|1|Ab|U|1273
*
6Z1P|1|Ab|A|1336
6Z1P|1|Ab|C|1337
6Z1P|1|Ab|U|1338
6Z1P|1|Ab|G|1339
6Z1P|1|Ab|G|1340
6Z1P|1|Ab|A|1341
6Z1P|1|Ab|A|1342
6Z1P|1|Ab|A|1343
6Z1P|1|Ab|U|1344
6Z1P|1|Ab|G|1345
6Z1P|1|Ab|U|1346

Current chains

Chain Ab

LSU rRNA_2

Nearby chains

Chain AB

Ribosomal protein L28

Chain AI

Ribosomal protein L27

Chain AP

mL101

Chain Ac

Ribosomal protein L2