IL_6Z6L_012

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCGCUCGUGG*CGGCG

Length

15 nucleotides

Bulged bases

6Z6L|1|L5|G|186

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|C|180
6Z6L|1|L5|C|181
6Z6L|1|L5|G|182
6Z6L|1|L5|C|183
6Z6L|1|L5|U|184
6Z6L|1|L5|C|185
6Z6L|1|L5|G|186
6Z6L|1|L5|U|187
6Z6L|1|L5|G|188
6Z6L|1|L5|G|189
*
6Z6L|1|L5|C|252
6Z6L|1|L5|G|253
6Z6L|1|L5|G|254
6Z6L|1|L5|C|255
6Z6L|1|L5|G|256

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LL

60S ribosomal protein L13

Chain Lh

60S ribosomal protein L35

Chain Lj

60S ribosomal protein L37