IL_6Z6L_066

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUCGCAGACCCGACGCCCGCCACG*CG

Length

26 nucleotides

Bulged bases

6Z6L|1|L5|C|1707

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|C|1694
6Z6L|1|L5|U|1695
6Z6L|1|L5|C|1696
6Z6L|1|L5|G|1697
6Z6L|1|L5|C|1698
6Z6L|1|L5|A|1699
6Z6L|1|L5|G|1700
6Z6L|1|L5|A|1701
6Z6L|1|L5|C|1702
6Z6L|1|L5|C|1703
6Z6L|1|L5|C|1704
6Z6L|1|L5|G|1705
6Z6L|1|L5|A|1706
6Z6L|1|L5|C|1707
6Z6L|1|L5|G|1708
6Z6L|1|L5|C|1709
6Z6L|1|L5|C|1714
6Z6L|1|L5|C|1715
6Z6L|1|L5|G|1716
6Z6L|1|L5|C|1717
6Z6L|1|L5|C|1718
6Z6L|1|L5|A|1719
6Z6L|1|L5|C|1720
6Z6L|1|L5|G|1721
*
6Z6L|1|L5|C|1841
6Z6L|1|L5|G|1842

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LF

60S ribosomal protein L7

Chain LQ

60S ribosomal protein L18

Chain LT

60S ribosomal protein L21

Chain Lb

60S ribosomal protein L29