IL_6Z6L_071
3D structure
- PDB id
- 6Z6L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of human CCDC124 bound to 80S ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUA*UUCU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6Z6L_071 not in the Motif Atlas
- Homologous match to IL_5TBW_041
- Geometric discrepancy: 0.1264
- The information below is about IL_5TBW_041
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6Z6L|1|L5|A|1746
6Z6L|1|L5|U|1747
6Z6L|1|L5|U|1748
6Z6L|1|L5|A|1749
*
6Z6L|1|L5|U|1781
6Z6L|1|L5|U|1782
6Z6L|1|L5|C|1783
6Z6L|1|L5|U|1784
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CE
- Coiled-coil domain-containing protein 124
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LD
- 60S ribosomal protein L5
- Chain LI
- 60S ribosomal protein L10-like
Coloring options: