IL_6Z6L_085

3D structure

PDB id

6Z6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human CCDC124 bound to 80S ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAG*CACC

Length

39 nucleotides

Bulged bases

6Z6L|1|L5|U|1980, 6Z6L|1|L5|G|1981, 6Z6L|1|L5|A|1984, 6Z6L|1|L5|A|1998

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6L|1|L5|G|1969
6Z6L|1|L5|A|1970
6Z6L|1|L5|C|1971
6Z6L|1|L5|G|1972
6Z6L|1|L5|G|1973
6Z6L|1|L5|U|1974
6Z6L|1|L5|G|1975
6Z6L|1|L5|G|1976
6Z6L|1|L5|C|1977
6Z6L|1|L5|C|1978
6Z6L|1|L5|A|1979
6Z6L|1|L5|U|1980
6Z6L|1|L5|G|1981
6Z6L|1|L5|G|1982
6Z6L|1|L5|A|1983
6Z6L|1|L5|A|1984
6Z6L|1|L5|G|1985
6Z6L|1|L5|U|1986
6Z6L|1|L5|C|1987
6Z6L|1|L5|G|1988
6Z6L|1|L5|G|1989
6Z6L|1|L5|A|1990
6Z6L|1|L5|A|1991
6Z6L|1|L5|U|1992
6Z6L|1|L5|C|1993
6Z6L|1|L5|C|1994
6Z6L|1|L5|G|1995
6Z6L|1|L5|C|1996
6Z6L|1|L5|U|1997
6Z6L|1|L5|A|1998
6Z6L|1|L5|A|1999
6Z6L|1|L5|G|2000
6Z6L|1|L5|G|2001
6Z6L|1|L5|A|2002
6Z6L|1|L5|G|2003
*
6Z6L|1|L5|C|2016
6Z6L|1|L5|A|2017
6Z6L|1|L5|C|2018
6Z6L|1|L5|C|2019

Current chains

Chain L5

28S rRNA

Nearby chains