IL_6Z6M_024

3D structure

PDB id

6Z6M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

6Z6M|1|L5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6M|1|L5|A|466
6Z6M|1|L5|U|467
6Z6M|1|L5|U|468
6Z6M|1|L5|C|469
6Z6M|1|L5|A|470
6Z6M|1|L5|A|471
6Z6M|1|L5|C|472
*
6Z6M|1|L5|G|682
6Z6M|1|L5|C|683
6Z6M|1|L5|G|684
6Z6M|1|L5|C|685
6Z6M|1|L5|A|686
6Z6M|1|L5|U|687
6Z6M|1|L5|U|688
6Z6M|1|L5|U|689

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LE

60S ribosomal protein L6

Chain Lr

60S ribosomal protein L28