IL_6Z6N_275

3D structure

PDB id

6Z6N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCCCGC*GCGGAGCG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6Z6N|1|S2|C|1750
6Z6N|1|S2|C|1751
6Z6N|1|S2|C|1752
6Z6N|1|S2|C|1753
6Z6N|1|S2|G|1754
6Z6N|1|S2|C|1755
*
6Z6N|1|S2|G|1777
6Z6N|1|S2|C|1778
6Z6N|1|S2|G|1779
6Z6N|1|S2|G|1780
6Z6N|1|S2|A|1781
6Z6N|1|S2|G|1782
6Z6N|1|S2|C|1783
6Z6N|1|S2|G|1784

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

60S ribosomal protein L24

Chain SG

40S ribosomal protein S6