IL_6ZJ3_017

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

CUGUGUC*GAUGUGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LC|C|351
6ZJ3|1|LC|U|352
6ZJ3|1|LC|G|353
6ZJ3|1|LC|U|354
6ZJ3|1|LC|G|355
6ZJ3|1|LC|U|356
6ZJ3|1|LC|C|357
*
6ZJ3|1|LC|G|451
6ZJ3|1|LC|A|452
6ZJ3|1|LC|U|453
6ZJ3|1|LC|G|454
6ZJ3|1|LC|U|455
6ZJ3|1|LC|G|456
6ZJ3|1|LC|G|457

Current chains

Chain LC

LSU rRNA chain 2

Nearby chains

Chain LX

Ribosomal protein eL13

Chain Lp

Ribosomal protein uL29