IL_6ZJ3_027
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- CC*GUGGCAGCUCCG
- Length
- 14 nucleotides
- Bulged bases
- 6ZJ3|1|LD|G|733, 6ZJ3|1|LD|C|738
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LD|C|670
6ZJ3|1|LD|C|671
*
6ZJ3|1|LD|G|731
6ZJ3|1|LD|U|732
6ZJ3|1|LD|G|733
6ZJ3|1|LD|G|734
6ZJ3|1|LD|C|735
6ZJ3|1|LD|A|736
6ZJ3|1|LD|G|737
6ZJ3|1|LD|C|738
6ZJ3|1|LD|U|739
6ZJ3|1|LD|C|740
6ZJ3|1|LD|C|741
6ZJ3|1|LD|G|742
Current chains
- Chain LD
- LSU rRNA chain 3
Nearby chains
- Chain LE
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF
- Large subunit ribosomal RNA; LSU rRNA
- Chain LR
- Ribosomal protein uL4
- Chain LZ
- Ribosomal protein eL14
- Chain Lg
- Ribosomal protein eL20
- Chain Lr
- Ribosomal protein uL30
Coloring options: