IL_6ZJ3_036

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GGCUGC*GGUC

Length

10 nucleotides

Bulged bases

6ZJ3|1|LE|U|813

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LE|G|810
6ZJ3|1|LE|G|811
6ZJ3|1|LE|C|812
6ZJ3|1|LE|U|813
6ZJ3|1|LE|G|814
6ZJ3|1|LE|C|815
*
6ZJ3|1|LE|G|830
6ZJ3|1|LE|G|831
6ZJ3|1|LE|U|832
6ZJ3|1|LE|C|833

Current chains

Chain LE

LSU rRNA chain 4

Nearby chains

Chain L6

Ribosomal protein eLEgr2

Chain LO

5S ribosomal RNA; 5S rRNA

Chain LS

Ribosomal protein uL5

Chain Lc

60S ribosomal protein L10