IL_6ZJ3_055
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- CAAUGAUGCAAAGUGUGACU*AAUG
- Length
- 24 nucleotides
- Bulged bases
- 6ZJ3|1|LE|U|1283, 6ZJ3|1|LE|C|1301
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LE|C|1277
6ZJ3|1|LE|A|1278
6ZJ3|1|LE|A|1279
6ZJ3|1|LE|U|1280
6ZJ3|1|LE|G|1281
6ZJ3|1|LE|A|1282
6ZJ3|1|LE|U|1283
6ZJ3|1|LE|G|1284
6ZJ3|1|LE|C|1285
6ZJ3|1|LE|A|1286
6ZJ3|1|LE|A|1287
6ZJ3|1|LE|A|1288
6ZJ3|1|LE|G|1289
6ZJ3|1|LE|U|1296
6ZJ3|1|LE|G|1297
6ZJ3|1|LE|U|1298
6ZJ3|1|LE|G|1299
6ZJ3|1|LE|A|1300
6ZJ3|1|LE|C|1301
6ZJ3|1|LE|U|1302
*
6ZJ3|1|LF|A|1470
6ZJ3|1|LF|A|1471
6ZJ3|1|LF|U|1472
6ZJ3|1|LF|G|1473
Current chains
- Chain LE
- LSU rRNA chain 4
- Chain LF
- LSU rRNA chain 5
Nearby chains
- Chain LR
- Ribosomal protein uL4
- Chain LU
- Ribosomal protein eL6
- Chain Le
- Ribosomal protein eL18
- Chain Lq
- Ribosomal protein eL29
- Chain Lr
- Ribosomal protein uL30
Coloring options: