IL_6ZJ3_062

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GAGAG*C(PSU)A(PSU)C

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LE|G|1328
6ZJ3|1|LE|A|1329
6ZJ3|1|LE|G|1330
6ZJ3|1|LE|A|1331
6ZJ3|1|LE|G|1332
*
6ZJ3|1|LE|C|1362
6ZJ3|1|LE|PSU|1363
6ZJ3|1|LE|A|1364
6ZJ3|1|LE|PSU|1365
6ZJ3|1|LE|C|1366

Current chains

Chain LE

LSU rRNA chain 4

Nearby chains

Chain LO

5S ribosomal RNA; 5S rRNA

Chain Lc

60S ribosomal protein L10

Chain Ld

Ribosomal protein uL18