IL_6ZJ3_069
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- AUGAC*G(OMU)GCU
- Length
- 10 nucleotides
- Bulged bases
- 6ZJ3|1|LF|G|1491
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LF|A|1489
6ZJ3|1|LF|U|1490
6ZJ3|1|LF|G|1491
6ZJ3|1|LF|A|1492
6ZJ3|1|LF|C|1493
*
6ZJ3|1|LF|G|1503
6ZJ3|1|LF|OMU|1504
6ZJ3|1|LF|G|1505
6ZJ3|1|LF|C|1506
6ZJ3|1|LF|U|1507
Current chains
- Chain LF
- LSU rRNA chain 5
Nearby chains
- Chain LE
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Large subunit ribosomal RNA; LSU rRNA
- Chain LO
- 5S ribosomal RNA; 5S rRNA
- Chain Lc
- 60S ribosomal protein L10
- Chain Lh
- Ribosomal protein eL21
- Chain Lq
- Ribosomal protein eL29
- Chain Lr
- Ribosomal protein uL30
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