IL_6ZJ3_103
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- A(PSU)CGAUCGGC*GGUGGUGU
- Length
- 18 nucleotides
- Bulged bases
- 6ZJ3|1|LG|G|2161, 6ZJ3|1|LG|U|2174
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LG|A|2153
6ZJ3|1|LG|PSU|2154
6ZJ3|1|LG|C|2155
6ZJ3|1|LG|G|2156
6ZJ3|1|LG|A|2157
6ZJ3|1|LG|U|2158
6ZJ3|1|LG|C|2159
6ZJ3|1|LG|G|2160
6ZJ3|1|LG|G|2161
6ZJ3|1|LG|C|2162
*
6ZJ3|1|LG|G|2172
6ZJ3|1|LG|G|2173
6ZJ3|1|LG|U|2174
6ZJ3|1|LG|G|2175
6ZJ3|1|LG|G|2176
6ZJ3|1|LG|U|2177
6ZJ3|1|LG|G|2178
6ZJ3|1|LG|U|2179
Current chains
- Chain LG
- LSU rRNA chain 6
Nearby chains
- Chain L5
- Ribosomal protein eL42
- Chain Lf
- Ribosomal protein eL19
- Chain Ln
- Ribosomal protein eL27
- Chain Ls
- Ribosomal protein eL30
- Chain Lw
- Ribosomal protein eL34
- Chain ST
- Ribosomal protein uS15
Coloring options: