IL_6ZJ3_105
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- GACGAAA(OMU)G*C(OMU)G(PSU)C
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LH|G|2339
6ZJ3|1|LH|A|2340
6ZJ3|1|LH|C|2341
6ZJ3|1|LH|G|2342
6ZJ3|1|LH|A|2343
6ZJ3|1|LH|A|2344
6ZJ3|1|LH|A|2345
6ZJ3|1|LH|OMU|2346
6ZJ3|1|LH|G|2347
*
6ZJ3|1|LH|C|2834
6ZJ3|1|LH|OMU|2835
6ZJ3|1|LH|G|2836
6ZJ3|1|LH|PSU|2837
6ZJ3|1|LH|C|2838
Current chains
- Chain LH
- LSU rRNA chain 7
Nearby chains
- Chain LE
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF
- Large subunit ribosomal RNA; LSU rRNA
- Chain LI
- Large subunit ribosomal RNA; LSU rRNA
- Chain LJ
- Large subunit ribosomal RNA; LSU rRNA
- Chain LM
- LSU rRNA chain 12
- Chain LN
- LSU rRNA chain 13
- Chain LQ
- Ribosomal protein uL3
- Chain Li
- Ribosomal protein uL22
- Chain Lt
- Ribosomal protein eL31
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