IL_6ZJ3_169

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

C(OMU)CCCCU*ACCAAG

Length

13 nucleotides

Bulged bases

6ZJ3|1|LJ|C|3682

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LJ|C|3635
6ZJ3|1|LJ|OMU|3636
6ZJ3|1|LJ|C|3637
6ZJ3|1|LJ|C|3638
6ZJ3|1|LJ|C|3639
6ZJ3|1|LJ|C|3640
6ZJ3|1|LJ|U|3641
*
6ZJ3|1|LJ|A|3681
6ZJ3|1|LJ|C|3682
6ZJ3|1|LJ|C|3683
6ZJ3|1|LJ|A|3684
6ZJ3|1|LJ|A|3685
6ZJ3|1|LJ|G|3686

Current chains

Chain LJ

LSU rRNA chain 9

Nearby chains

Chain LH

Large subunit ribosomal RNA; LSU rRNA

Chain LM

LSU rRNA chain 12

Chain LQ

Ribosomal protein uL3

Chain LY

Ribosomal protein uL14

Chain Lm

Ribosomal protein eL24