IL_6ZJ3_268

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

A(OMU)UG*CUUGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|S1|A|1640
6ZJ3|1|S1|OMU|1641
6ZJ3|1|S1|U|1642
6ZJ3|1|S1|G|1643
*
6ZJ3|1|S1|C|1662
6ZJ3|1|S1|U|1663
6ZJ3|1|S1|U|1664
6ZJ3|1|S1|G|1665
6ZJ3|1|S1|A|1666
6ZJ3|1|S1|U|1667

Current chains

Chain S1

18S rRNA

Nearby chains

Chain SN

Ribosomal protein eS10

Chain SQ

Ribosomal protein eS12

Chain SS

Ribosomal protein uS14

Chain Sf

Ribosomal protein eS31