IL_6ZJ3_295

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

CAUC(A2M)GGAG*CGAAAUUGG

Length

18 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|S1|C|2176
6ZJ3|1|S1|A|2177
6ZJ3|1|S1|U|2178
6ZJ3|1|S1|C|2179
6ZJ3|1|S1|A2M|2180
6ZJ3|1|S1|G|2181
6ZJ3|1|S1|G|2182
6ZJ3|1|S1|A|2183
6ZJ3|1|S1|G|2184
*
6ZJ3|1|S1|C|2225
6ZJ3|1|S1|G|2226
6ZJ3|1|S1|A|2227
6ZJ3|1|S1|A|2228
6ZJ3|1|S1|A|2229
6ZJ3|1|S1|U|2230
6ZJ3|1|S1|U|2231
6ZJ3|1|S1|G|2232
6ZJ3|1|S1|G|2233

Current chains

Chain S1

18S rRNA

Nearby chains

Chain LH

Large subunit ribosomal RNA; LSU rRNA

Chain Lm

Ribosomal protein eL24

Chain SG

Ribosomal protein eS6

Chain SK

Ribosomal protein eS8