IL_6ZJ3_314
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- C(PSU)UUGCCACG*CUUC(OMU)G
- Length
- 16 nucleotides
- Bulged bases
- 6ZJ3|1|LE|C|1414, 6ZJ3|1|LE|U|1449, 6ZJ3|1|LE|C|1451
- QA status
- Modified nucleotides: PSU, OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LE|C|1406
6ZJ3|1|LE|PSU|1407
6ZJ3|1|LE|U|1408
6ZJ3|1|LE|U|1409
6ZJ3|1|LE|G|1410
6ZJ3|1|LE|C|1411
6ZJ3|1|LE|C|1412
6ZJ3|1|LE|A|1413
6ZJ3|1|LE|C|1414
6ZJ3|1|LE|G|1415
*
6ZJ3|1|LE|C|1448
6ZJ3|1|LE|U|1449
6ZJ3|1|LE|U|1450
6ZJ3|1|LE|C|1451
6ZJ3|1|LE|OMU|1452
6ZJ3|1|LE|G|1453
Current chains
- Chain LE
- LSU rRNA chain 4
Nearby chains
- Chain L7
- Ribosomal protein eLEgr3
- Chain LI
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ld
- Ribosomal protein uL18
- Chain Lh
- Ribosomal protein eL21
- Chain Lq
- Ribosomal protein eL29
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