IL_6ZJ3_320

3D structure

PDB id

6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

GACUCAC(OMG)*CGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZJ3|1|LG|G|2139
6ZJ3|1|LG|A|2140
6ZJ3|1|LG|C|2141
6ZJ3|1|LG|U|2142
6ZJ3|1|LG|C|2143
6ZJ3|1|LG|A|2144
6ZJ3|1|LG|C|2145
6ZJ3|1|LG|OMG|2146
*
6ZJ3|1|LG|C|2188
6ZJ3|1|LG|G|2189
6ZJ3|1|LG|C|2190

Current chains

Chain LG

LSU rRNA chain 6

Nearby chains

Chain LH

Large subunit ribosomal RNA; LSU rRNA

Chain Lw

Ribosomal protein eL34

Chain Lz

Ribosomal protein eL38