IL_6ZJ3_343
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- UCGAGGCAGAG*CGCCAACACCAACUGGA
- Length
- 28 nucleotides
- Bulged bases
- 6ZJ3|1|LK|C|3756, 6ZJ3|1|LK|A|3762, 6ZJ3|1|LK|G|3763, 6ZJ3|1|LK|U|3798, 6ZJ3|1|LK|G|3800
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ZJ3|1|LK|U|3755
6ZJ3|1|LK|C|3756
6ZJ3|1|LK|G|3757
6ZJ3|1|LK|A|3758
6ZJ3|1|LK|G|3759
6ZJ3|1|LK|G|3760
6ZJ3|1|LK|C|3761
6ZJ3|1|LK|A|3762
6ZJ3|1|LK|G|3763
6ZJ3|1|LK|A|3764
6ZJ3|1|LK|G|3765
*
6ZJ3|1|LK|C|3785
6ZJ3|1|LK|G|3786
6ZJ3|1|LK|C|3787
6ZJ3|1|LK|C|3788
6ZJ3|1|LK|A|3789
6ZJ3|1|LK|A|3790
6ZJ3|1|LK|C|3791
6ZJ3|1|LK|A|3792
6ZJ3|1|LK|C|3793
6ZJ3|1|LK|C|3794
6ZJ3|1|LK|A|3795
6ZJ3|1|LK|A|3796
6ZJ3|1|LK|C|3797
6ZJ3|1|LK|U|3798
6ZJ3|1|LK|G|3799
6ZJ3|1|LK|G|3800
6ZJ3|1|LK|A|3801
Current chains
- Chain LK
- LSU rRNA chain 10
Nearby chains
- Chain LD
- LSU rRNA chain 3
- Chain LL
- LSU rRNA chain 11
- Chain LT
- Ribosomal protein uL6
- Chain LU
- Ribosomal protein eL6
- Chain LW
- Ribosomal protein uL13
- Chain LZ
- Ribosomal protein eL14
- Chain Lg
- Ribosomal protein eL20
- Chain Lv
- Ribosomal protein eL33
Coloring options: