IL_6ZJ3_344
3D structure
- PDB id
- 6ZJ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.15 Å
Loop
- Sequence
- G(PSU)U*G(PSU)C
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZJ3_344 not in the Motif Atlas
- Geometric match to IL_9D9P_001
- Geometric discrepancy: 0.3671
- The information below is about IL_9D9P_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68118.5
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
6ZJ3|1|LM|G|3962
6ZJ3|1|LM|PSU|3963
6ZJ3|1|LM|U|3964
*
6ZJ3|1|LN|G|3968
6ZJ3|1|LN|PSU|3969
6ZJ3|1|LN|C|3970
Current chains
- Chain LM
- LSU rRNA chain 12
- Chain LN
- LSU rRNA chain 13
Nearby chains
- Chain LH
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lf
- Ribosomal protein eL19
- Chain Lj
- Ribosomal protein eL22
- Chain SK
- Ribosomal protein eS8
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