IL_6ZM6_088
3D structure
- PDB id
- 6ZM6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- UAUAC*GUG
- Length
- 8 nucleotides
- Bulged bases
- 6ZM6|1|AA|U|1259
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ZM6_088 not in the Motif Atlas
- Geometric match to IL_4LFB_044
- Geometric discrepancy: 0.1352
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6ZM6|1|AA|U|1257
6ZM6|1|AA|A|1258
6ZM6|1|AA|U|1259
6ZM6|1|AA|A|1260
6ZM6|1|AA|C|1261
*
6ZM6|1|AA|G|1334
6ZM6|1|AA|U|1335
6ZM6|1|AA|G|1336
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
- Chain w
- Transfer RNA; tRNA
- Chain y
- mRNA
Coloring options: