IL_6ZM7_153

3D structure

PDB id

6ZM7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

ACAUUU*ACCAU

Length

11 nucleotides

Bulged bases

6ZM7|1|L5|C|4670

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ZM7|1|L5|A|4624
6ZM7|1|L5|C|4625
6ZM7|1|L5|A|4626
6ZM7|1|L5|U|4627
6ZM7|1|L5|U|4628
6ZM7|1|L5|U|4629
*
6ZM7|1|L5|A|4669
6ZM7|1|L5|C|4670
6ZM7|1|L5|C|4671
6ZM7|1|L5|A|4672
6ZM7|1|L5|U|4673

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23

Chain LW

60S ribosomal protein L24